pfSNP Gene Information Collection
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Mouse over each column header to see if the genes are enriched in any key terms (e.g: Co-expressed in certain tissue or resides in same pathway)
 Gene
Name
Chr
Text Cloud for Chromosome
6(1)  
Tissue
Expression
Text Cloud for Tissue Expression
GO Term
Text Cloud for GO Term
KEGG Path
Text Cloud for KEGG Path
PharmGKB Reported
Association
Text Cloud for PharmGKB Drug Response Association
mSigDB
Pathway
Text Cloud for mSigDB Pathway
WALKER_MM_SNP_DIFF(1)  
OMIM
Text Cloud for OMIM Term
GAD
Text Cloud for GAD Term
View SNP
in this
gene
6
The table above shows the information regarding your gene of interest. You can click on 'View pfSNP' to show the potentially functional SNPs in your gene so that you can pick SNP candidates for gene based association study.

More about pfSNP ...
pfSNP is an integrative portal providing both extensive gene level information as well as detailed SNP function information for the SNPs linked to your gene (resides within the gene region as well as 5K basepairs upstream and downstream of the gene).

We have been cited as one of the useful meta tools for SNP function analysis by UK Gen2Phen biomedical knowledge center community.

We have been cited as a useful tool for "Candidate SNP selection and SNP annotation" by GenEpi Toolbox.


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